Identification of a novel family of laminin N-terminal alternate splice isoforms: structural and functional characterization.
pmid: 19773554
pmc: PMC2790989
Identification of a novel family of laminin N-terminal alternate splice isoforms: structural and functional characterization.
The laminins are a family of heterotrimeric basement membrane proteins that play roles in cellular adhesion, migration, and tissue morphogenesis. Through in silico analysis of the laminin-encoding genes, we identified a novel family of alternate splice isoforms derived from the 5'-end of the LAMA3 and LAMA5 genes. These isoforms resemble the netrins in that they contain a laminin N-terminal domain followed by a short stretch of laminin-type epidermal growth factor-like repeats. We suggest the terms LaNt (laminin N terminus) alpha3 and LaNt alpha5, for the predicted protein products of these mRNAs. RT-PCR confirmed the presence of these transcripts at the mRNA level. Moreover, they exhibit differential, tissue-specific, expression profiles. To confirm the existence of LaNt alpha3 protein, we generated an antibody to a unique domain within the putative polypeptide. This antibody recognizes a protein at the predicted molecular mass of 64 kDa by immunoblotting. Furthermore, immunofluorescence analyses revealed a basement membrane staining in epithelial tissue for LaNt alpha3 and LaNt alpha3 localized along the substratum-associated surface of cultured keratinocytes. We have also tested the functionality LaNt alpha3 through RNAi-mediated knockdown. Keratinocytes exhibiting specific knockdown of LaNt alpha3 displayed impaired adhesion, stress resistance, and reduced ability to close scratch wounds in vitro.
- MRC Human Genetics Unit, University of Edinburgh, Edinburgh, UK United Kingdom
- University of Dundee United Kingdom
Keratinocytes, 570, BASEMENT-MEMBRANES, GENES, EXTRACELLULAR-MATRIX PROTEINS, 610, Glycobiology and Extracellular Matrices, MOUSE, DIFFERENTIAL EXPRESSION, Mice, Cell Adhesion, Animals, Humans, Protein Isoforms, ALPHA-CHAINS, RNA, Messenger, Wound Healing, EXON USAGE, Reverse Transcriptase Polymerase Chain Reaction, Antibodies, Monoclonal, GAMMA-2 CHAIN, Protein Structure, Tertiary, MONOCLONAL-ANTIBODY GB3, Alternative Splicing, Organ Specificity, Laminin, CELL-ADHESION, HeLa Cells
Keratinocytes, 570, BASEMENT-MEMBRANES, GENES, EXTRACELLULAR-MATRIX PROTEINS, 610, Glycobiology and Extracellular Matrices, MOUSE, DIFFERENTIAL EXPRESSION, Mice, Cell Adhesion, Animals, Humans, Protein Isoforms, ALPHA-CHAINS, RNA, Messenger, Wound Healing, EXON USAGE, Reverse Transcriptase Polymerase Chain Reaction, Antibodies, Monoclonal, GAMMA-2 CHAIN, Protein Structure, Tertiary, MONOCLONAL-ANTIBODY GB3, Alternative Splicing, Organ Specificity, Laminin, CELL-ADHESION, HeLa Cells
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