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European Journal of Biochemistry
Article . 2000 . Peer-reviewed
License: Wiley Online Library User Agreement
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A class of zinc fingers involved in protein–protein interactions

Biophysical characterization of CCHC fingers from Fog and U‐shaped
Authors: J M, Matthews; K, Kowalski; C K, Liew; B K, Sharpe; A H, Fox; M, Crossley; J P, MacKay;

A class of zinc fingers involved in protein–protein interactions

Abstract

Zinc fingers (ZnFs) are extremely common protein domains. Several classes of ZnFs are distinguished by the nature and spacing of their zinc‐coordinating residues. While the structure and function of some ZnFs are well characterized, many others have been identified only through their amino acid sequence. A number of proteins contain a conserved C‐X2‐C‐X12‐H‐X1–5‐C sequence, which is similar to the spacing observed for the ‘classic’ CCHH ZnFs. Although these domains have been implicated in protein–protein (and not protein–nucleic acid) interactions, nothing is known about their structure or function at a molecular level. Here, we address this problem through the expression and biophysical characterization of several CCHC‐type zinc fingers from the erythroid transcription factor FOG and the related Drosophila protein U‐shaped. Each of these domains does indeed fold in a zinc‐dependent fashion, coordinating the metal in a tetrahedral manner through the sidechains of one histidine and three cysteine residues, and forming extremely thermostable structures. Analysis of CD spectra suggests an overall fold similar to that of the CCHH fingers, and indeed a point mutant of FOG‐F1 in which the final cysteine residue is replaced by histidine remains capable of folding. However, the CCHC (as opposed to CCHH) motif is a prerequisite for GATA‐1 binding activity, demonstrating that CCHC and CCHH topologies are not interchangeable. This demonstration that members of a structurally distinct subclass of genuine zinc finger domains are involved in the mediation of protein–protein interactions has implications for the prediction of protein function from nucleotide sequences.

Related Organizations
Keywords

Protein Folding, Recombinant Fusion Proteins, Spectrum Analysis, Molecular Sequence Data, Temperature, Nuclear Proteins, Hydrogen-Ion Concentration, Protein Structure, Secondary, DNA-Binding Proteins, Drosophila melanogaster, Mutation, Animals, Drosophila Proteins, Erythroid-Specific DNA-Binding Factors, Insect Proteins, Histidine, Amino Acid Sequence, Cysteine, Carrier Proteins, Protein Binding

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
63
Top 10%
Top 10%
Top 10%
bronze