Early Evolution of Transcription Systems and Divergence of Archaea and Bacteria
Early Evolution of Transcription Systems and Divergence of Archaea and Bacteria
DNA template-dependent multi-subunit RNA polymerases (RNAPs) found in all three domains of life and some viruses are of the two-double-Ψ-β-barrel (DPBB) type. The 2-DPBB protein format is also found in some RNA template-dependent RNAPs and a major replicative DNA template-dependent DNA polymerase (DNAP) from Archaea (PolD). The 2−DPBB family of RNAPs and DNAPs probably evolved prior to the last universal common cellular ancestor (LUCA). Archaeal Transcription Factor B (TFB) and bacterial σ factors include homologous strings of helix-turn-helix units. The consequences of TFB-σ homology are discussed in terms of the evolution of archaeal and bacterial core promoters. Domain-specific DPBB loop inserts functionally connect general transcription factors to the RNAP active site. Archaea appear to be more similar to LUCA than Bacteria. Evolution of bacterial σ factors from TFB appears to have driven divergence of Bacteria from Archaea, splitting the prokaryotic domains.
- Department of Biology United States
- University of Wisconsin–Oshkosh United States
- UNIVERSITY OF WISCONSIN-MADISON United States
- University of Wisconsin–Madison United States
- Wayne State College United States
promoter evolution, archaea, double-Ψ-β-barrel, QH301-705.5, Molecular Biosciences, general transcription factor evolution, Biology (General), bacteria, transcription
promoter evolution, archaea, double-Ψ-β-barrel, QH301-705.5, Molecular Biosciences, general transcription factor evolution, Biology (General), bacteria, transcription
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