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Proceedings of the National Academy of Sciences
Article . 2013 . Peer-reviewed
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Structural basis for cytosolic double-stranded RNA surveillance by human oligoadenylate synthetase 1

Authors: Jesse, Donovan; Matthew, Dufner; Alexei, Korennykh;

Structural basis for cytosolic double-stranded RNA surveillance by human oligoadenylate synthetase 1

Abstract

The human sensor of double-stranded RNA (dsRNA) oligoadenylate synthetase 1 (hOAS1) polymerizes ATP into 2′,5′-linked iso-RNA (2-5A) involved in innate immunity, cell cycle, and differentiation. We report the crystal structure of hOAS1 in complex with dsRNA and 2′-deoxy ATP at 2.7 Å resolution, which reveals the mechanism of cytoplasmic dsRNA recognition and activation of oligoadenylate synthetases. Human OAS1 recognizes dsRNA using a previously uncharacterized protein/RNA interface that forms via a conformational change induced by binding of dsRNA. The protein/RNA interface involves two minor grooves and has no sequence-specific contacts, with the exception of a single hydrogen bond between the -NH 2 group of nucleobase G17 and the carbonyl oxygen of serine 56. Using a biochemical readout, we show that hOAS1 undergoes more than 20,000-fold activation upon dsRNA binding and that canonical or GU-wobble substitutions produce dsRNA mutants that retain either full or partial activity, in agreement with the crystal structure. Ultimately, the binding of dsRNA promotes an elaborate conformational rearrangement in the N-terminal lobe of hOAS1, which brings residues D75, D77, and D148 into proximity and creates coordination geometry for binding of two catalytic Mg 2+ ions and ATP. The assembly of this critical active-site structure provides the gate that couples binding of dsRNA to the production and downstream functions of 2-5A.

Related Organizations
Keywords

Models, Molecular, Binding Sites, Oligoribonucleotides, Base Sequence, Sequence Homology, Amino Acid, Adenine Nucleotides, Molecular Sequence Data, Crystallography, X-Ray, Protein Structure, Tertiary, Substrate Specificity, Enzyme Activation, Cytosol, Deoxyadenine Nucleotides, 2',5'-Oligoadenylate Synthetase, Biocatalysis, Humans, Nucleic Acid Conformation, Amino Acid Sequence, Protein Binding, RNA, Double-Stranded

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
146
Top 1%
Top 10%
Top 1%
bronze