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The PHD and Chromo Domains Regulate the ATPase Activity of the Human Chromatin Remodeler CHD4

Authors: Watson, A; Mahajan, P; Mertens, H; Deery, M; Zhang, W; Pham, P; Du, X; +12 Authors

The PHD and Chromo Domains Regulate the ATPase Activity of the Human Chromatin Remodeler CHD4

Abstract

The NuRD (nucleosome remodeling and deacetylase) complex serves as a crucial epigenetic regulator of cell differentiation, proliferation, and hematopoietic development by coupling the deacetylation and demethylation of histones, nucleosome mobilization, and the recruitment of transcription factors. The core nucleosome remodeling function of the mammalian NuRD complex is executed by the helicase-domain-containing ATPase CHD4 (Mi-2β) subunit, which also contains N-terminal plant homeodomain (PHD) and chromo domains. The mode of regulation of chromatin remodeling by CHD4 is not well understood, nor is the role of its PHD and chromo domains. Here, we use small-angle X-ray scattering, nucleosome binding ATPase and remodeling assays, limited proteolysis, cross-linking, and tandem mass spectrometry to propose a three-dimensional structural model describing the overall shape and domain interactions of CHD4 and discuss the relevance of these for regulating the remodeling of chromatin by the NuRD complex.

Keywords

570, Autoantigens: chemistry, CHD4 protein, human, Electrophoretic Mobility Shift Assay, histone, NuRD complex, Autoantigens: metabolism, Autoantigens, Models, Biological, Article, chromatin remodeling, Humans, transcriptional regulation, Adenosine Triphosphatases: metabolism, Molecular Biology, info:eu-repo/classification/ddc/570, Mi-2 Nucleosome Remodeling and Deacetylase Complex: chemistry, Adenosine Triphosphatases, Binding Sites, chromo domain helicase DNA-binding protein 4, Chromatin: metabolism, 540, Nucleosomes: metabolism, Chromatin Assembly and Disassembly, Chromatin, Nucleosomes, Protein Structure, Tertiary, Proteolysis, Mi-2 Nucleosome Remodeling and Deacetylase Complex: metabolism, Mi-2 Nucleosome Remodeling and Deacetylase Complex

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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    Top 10%
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    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
69
Top 10%
Top 10%
Top 10%
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