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Skin-resident innate lymphoid cells converge on a pathogenic effector state

Authors: Piotr Bielecki; Samantha J. Riesenfeld; Jan-Christian Hütter; Elena Torlai Triglia; Monika S. Kowalczyk; Roberto R. Ricardo-Gonzalez; Mi Lian; +25 Authors

Skin-resident innate lymphoid cells converge on a pathogenic effector state

Abstract

Tissue-resident innate lymphoid cells (ILCs) help sustain barrier function and respond to local signals. ILCs are traditionally classified as ILC1, ILC2 or ILC3 on the basis of their expression of specific transcription factors and cytokines1. In the skin, disease-specific production of ILC3-associated cytokines interleukin (IL)-17 and IL-22 in response to IL-23 signalling contributes to dermal inflammation in psoriasis. However, it is not known whether this response is initiated by pre-committed ILCs or by cell-state transitions. Here we show that the induction of psoriasis in mice by IL-23 or imiquimod reconfigures a spectrum of skin ILCs, which converge on a pathogenic ILC3-like state. Tissue-resident ILCs were necessary and sufficient, in the absence of circulatory ILCs, to drive pathology. Single-cell RNA-sequencing (scRNA-seq) profiles of skin ILCs along a time course of psoriatic inflammation formed a dense transcriptional continuum-even at steady state-reflecting fluid ILC states, including a naive or quiescent-like state and an ILC2 effector state. Upon disease induction, the continuum shifted rapidly to span a mixed, ILC3-like subset also expressing cytokines characteristic of ILC2s, which we inferred as arising through multiple trajectories. We confirmed the transition potential of quiescent-like and ILC2 states using in vitro experiments, single-cell assay for transposase-accessible chromatin using sequencing (scATAC-seq) and in vivo fate mapping. Our results highlight the range and flexibility of skin ILC responses, suggesting that immune activities primed in healthy tissues dynamically adapt to provocations and, left unchecked, drive pathological remodelling.

Countries
Germany, United States, United Kingdom, United States
Keywords

Male, 570, Time Factors, General Science & Technology, 1.1 Normal biological development and functioning, Immunology, 610, Autoimmune Disease, Interleukin-23, Article, Mice, Small Cytoplasmic, RNA, Small Cytoplasmic, Genetics, 2.1 Biological and endogenous factors, Innate, Animals, Psoriasis, Cell Lineage, Lymphocytes, Skin, Inflammation, Multidisciplinary, Biomedical and Clinical Sciences, Animal, Inflammatory and immune system, Immunity, Reproducibility of Results, 600, Cell Differentiation, Biological Sciences, Chromatin, Immunity, Innate, Disease Models, Animal, Latent Class Analysis, Disease Models, RNA, Female

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    citations
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 1%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Top 10%
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 0.1%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
222
Top 1%
Top 10%
Top 0.1%
Green
bronze