Follow-up of a major linkage peak on chromosome 1 reveals suggestive QTLs associated with essential hypertension: GenNet study
Follow-up of a major linkage peak on chromosome 1 reveals suggestive QTLs associated with essential hypertension: GenNet study
Essential hypertension is a major cardiovascular risk factor and a large proportion of this risk is genetic. Identification of genomic regions consistently associated with hypertension has been difficult in association studies to date as this requires large sample sizes.We previously published a large genome-wide linkage scan in Americans of African (AA) and European (EA) descent in the GenNet Network of the Family Blood Pressure Program (FBPP). A highly significant linkage peak was identified on chr1q spanning a region of 100 cM. In this study, we genotyped 1569 SNPs under this linkage peak in 2379 individuals to identify whether common genetic variants were associated with blood pressure (BP) at this locus.Our analysis, using two different family-based association tests, provides suggestive evidence (P or =8 x 10(-5)). In summary, we show that systematic follow-up of a linkage signal can help discover candidate variants for essential hypertension that require a follow-up in yet larger samples. The failure to identify common variants is either because of low statistical power or the existence of rare coding variants in specific families or both, which require additional studies to clarify.
- University of Geneva Switzerland
- Loyola University Chicago United States
- Johns Hopkins University School of Medicine United States
- Johns Hopkins Medicine United States
- Johns Hopkins University United States
Adult, Male, Quality Control, Adolescent, Genetic Linkage, Quantitative Trait Loci, White People, Young Adult, Quantitative Trait Loci/*genetics, 616, Humans, Genetic Predisposition to Disease, European Continental Ancestry Group/genetics, American Indian or Alaska Native, American Native Continental Ancestry Group/genetics, Middle Aged, Chromosomes, Human, Pair 1/*genetics, *Genetic Predisposition to Disease, Phenotype, Chromosomes, Human, Pair 1, Hypertension/*genetics, Hypertension, Female, *Genetic Linkage, ddc: ddc:616
Adult, Male, Quality Control, Adolescent, Genetic Linkage, Quantitative Trait Loci, White People, Young Adult, Quantitative Trait Loci/*genetics, 616, Humans, Genetic Predisposition to Disease, European Continental Ancestry Group/genetics, American Indian or Alaska Native, American Native Continental Ancestry Group/genetics, Middle Aged, Chromosomes, Human, Pair 1/*genetics, *Genetic Predisposition to Disease, Phenotype, Chromosomes, Human, Pair 1, Hypertension/*genetics, Hypertension, Female, *Genetic Linkage, ddc: ddc:616
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