Detection and quantitation of bovine respiratory syncytial virus using real-time quantitative RT-PCR and quantitative competitive RT-PCR assays
pmid: 15350726
Detection and quantitation of bovine respiratory syncytial virus using real-time quantitative RT-PCR and quantitative competitive RT-PCR assays
A single tube, fluorogenic probe-based, real-time quantitative reverse transcription-polymerase chain reaction (Q-RT-PCR) assay was developed for detection and quantitation of bovine respiratory syncytial virus (BRSV) using BioRad's iCycler iQ. Real-time Q-RT-PCR was compared with quantitative competitive RT-PCR (QC-RT-PCR) and viral titers. Viral mRNA levels were measured in BRSV-infected bovine turbinate cell lysate harvested at eight time points (1.5, 6, 12, 24, 36, 48, 60, 72 h) post-infection. A homologous BRSV cRNA standard was used for quantitation of the mRNA by plotting a standard curve of cycle threshold (Ct) values versus standard 10-fold dilutions of cRNA of known concentrations. Detection as low as 171 copies/microl of standard BRSV cRNA was possible. For QC-RT-PCR, a competitor RNA molecule having a deletion was designed and used for quantitation of the BRSV viral mRNA. The results of real-time Q-RT-PCR and QC-RT-PCR assays showed a positive correlation. Real-time Q-RT-PCR was a sensitive, specific, rapid, and efficient method that eliminates the post-PCR processing steps when compared to QC-RT-PCR. Quantitation of BRSV using real-time Q-RT-PCR will have application in studies aimed at understanding the pathogenesis of BRSV.
- University of Nebraska System United States
- University of Nebraska-Lincoln United States
- University of Nebraska–Lincoln United States
iCycler, Real-time quantitative RT-PCR, Time Factors, Quantitative competitive RT-PCR, Reverse Transcriptase Polymerase Chain Reaction, 610, Respiratory Syncytial Virus, Bovine, Reference Standards, Sensitivity and Specificity, 630, Fluorescence, Cell Line, Bovine respiratory syncytial virus, Virology, Animals, RNA, Viral, Cattle, RNA, Messenger, Fluorescent Dyes
iCycler, Real-time quantitative RT-PCR, Time Factors, Quantitative competitive RT-PCR, Reverse Transcriptase Polymerase Chain Reaction, 610, Respiratory Syncytial Virus, Bovine, Reference Standards, Sensitivity and Specificity, 630, Fluorescence, Cell Line, Bovine respiratory syncytial virus, Virology, Animals, RNA, Viral, Cattle, RNA, Messenger, Fluorescent Dyes
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