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Molecular Biology of the Cell
Article . 2008 . Peer-reviewed
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Deletion of Many Yeast Introns Reveals a Minority of Genes that Require Splicing for Function

Authors: Julie, Parenteau; Mathieu, Durand; Steeve, Véronneau; Andrée-Anne, Lacombe; Geneviève, Morin; Valérie, Guérin; Bojana, Cecez; +6 Authors

Deletion of Many Yeast Introns Reveals a Minority of Genes that Require Splicing for Function

Abstract

Splicing regulates gene expression and contributes to proteomic diversity in higher eukaryotes. However, in yeast only 283 of the 6000 genes contain introns and their impact on cell function is not clear. To assess the contribution of introns to cell function, we initiated large-scale intron deletions in yeast with the ultimate goal of creating an intron-free model eukaryote. We show that about one-third of yeast introns are not essential for growth. Only three intron deletions caused severe growth defects, but normal growth was restored in all cases by expressing the intronless mRNA from a heterologous promoter. Twenty percent of the intron deletions caused minor phenotypes under different growth conditions. Strikingly, the combined deletion of all introns from the 15 cytoskeleton-related genes did not affect growth or strain fitness. Together, our results show that although the presence of introns may optimize gene expression and provide benefit under stress, a majority of introns could be removed with minor consequences on growth under laboratory conditions, supporting the view that many introns could be phased out of Saccharomyces cerevisiae without blocking cell growth.

Related Organizations
Keywords

Saccharomyces cerevisiae Proteins, Gene Expression Profiling, RNA Splicing, Genes, Fungal, Saccharomyces cerevisiae, Introns, Phenotype, Gene Expression Regulation, Fungal, Selection, Genetic, Deoxyribonucleases, Type II Site-Specific, Promoter Regions, Genetic, Cytoskeleton, Sequence Deletion

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    Top 10%
    influence
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
104
Top 10%
Top 10%
Top 10%
bronze