Genome-Wide Association Study of Tanning Phenotype in a Population of European Ancestry
Genome-Wide Association Study of Tanning Phenotype in a Population of European Ancestry
We conducted a multistage genome-wide association study (GWAS) of tanning response after exposure to sunlight in over 9,000 men and women of European ancestry who live in the United States. An initial analysis of 528,173 single-nucleotide polymorphisms (SNPs) genotyped on 2,287 women identified LOC401937 (rs966321) on chromosome 1 as a novel locus highly associated with tanning ability, and we confirmed this association in 870 women controls from a skin cancer case-control study with joint P-value=1.6 x 10(-9). We further genotyped this SNP in two subsequent replication studies (one with 3,750 women and the other with 2,405 men). This association was not replicated in either of these two studies. We found that several SNPs reaching the genome-wide significance level are located in or adjacent to the loci previously known as pigmentation genes: MATP, IRF4, TYR, OCA2, and MC1R. Overall, these tanning ability-related loci are similar to the hair color-related loci previously reported in the GWAS of hair color.
- National Cancer Institute United States
- Broad Institute United States
- Rowland Institute at Harvard United States
- Department of Epidemiology Harvard School of Public Health United States
- Harvard University United States
Sunbathing, Ubiquitin-Protein Ligases, Chromosome Mapping, Membrane Transport Proteins, Cell Biology, Dermatology, Biochemistry, Polymorphism, Single Nucleotide, White People, Phenotype, Guanine Nucleotide Exchange Factors, Humans, Hair Color, Molecular Biology, Receptor, Melanocortin, Type 1, Genome-Wide Association Study
Sunbathing, Ubiquitin-Protein Ligases, Chromosome Mapping, Membrane Transport Proteins, Cell Biology, Dermatology, Biochemistry, Polymorphism, Single Nucleotide, White People, Phenotype, Guanine Nucleotide Exchange Factors, Humans, Hair Color, Molecular Biology, Receptor, Melanocortin, Type 1, Genome-Wide Association Study
57 Research products, page 1 of 6
- 2017IsRelatedTo
- 2017IsRelatedTo
- 2017IsRelatedTo
- 2017IsRelatedTo
- 2017IsRelatedTo
- 2017IsRelatedTo
- 2017IsRelatedTo
- 2017IsRelatedTo
- 2017IsRelatedTo
- 2017IsRelatedTo
chevron_left - 1
- 2
- 3
- 4
- 5
chevron_right
citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).124 popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.Top 10% influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).Top 10% impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.Top 10%
