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Journal of Investigative Dermatology
Article
License: Elsevier Non-Commercial
Data sources: UnpayWall
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Journal of Investigative Dermatology
Article . 2009
License: Elsevier Non-Commercial
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Journal of Investigative Dermatology
Article . 2009 . Peer-reviewed
License: Elsevier Non-Commercial
Data sources: Crossref
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Genome-Wide Association Study of Tanning Phenotype in a Population of European Ancestry

Authors: Nan, Hongmei; Kraft, Peter; Qureshi, Abrar A.; Guo, Qun; Chen, Constance; Hankinson, Susan E.; Hu, Frank B.; +5 Authors

Genome-Wide Association Study of Tanning Phenotype in a Population of European Ancestry

Abstract

We conducted a multistage genome-wide association study (GWAS) of tanning response after exposure to sunlight in over 9,000 men and women of European ancestry who live in the United States. An initial analysis of 528,173 single-nucleotide polymorphisms (SNPs) genotyped on 2,287 women identified LOC401937 (rs966321) on chromosome 1 as a novel locus highly associated with tanning ability, and we confirmed this association in 870 women controls from a skin cancer case-control study with joint P-value=1.6 x 10(-9). We further genotyped this SNP in two subsequent replication studies (one with 3,750 women and the other with 2,405 men). This association was not replicated in either of these two studies. We found that several SNPs reaching the genome-wide significance level are located in or adjacent to the loci previously known as pigmentation genes: MATP, IRF4, TYR, OCA2, and MC1R. Overall, these tanning ability-related loci are similar to the hair color-related loci previously reported in the GWAS of hair color.

Keywords

Sunbathing, Ubiquitin-Protein Ligases, Chromosome Mapping, Membrane Transport Proteins, Cell Biology, Dermatology, Biochemistry, Polymorphism, Single Nucleotide, White People, Phenotype, Guanine Nucleotide Exchange Factors, Humans, Hair Color, Molecular Biology, Receptor, Melanocortin, Type 1, Genome-Wide Association Study

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    124
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
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    Top 10%
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    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
124
Top 10%
Top 10%
Top 10%
hybrid