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FEBS Journal
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FEBS Journal
Article . 2011 . Peer-reviewed
License: Wiley Online Library User Agreement
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FEBS Journal
Article . 2011
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Identification of candidate substrates for poly(ADP‐ribose) polymerase‐2 (PARP2) in the absence of DNA damage using high‐density protein microarrays

Authors: Rita Perego; Rosita Lupi; Luisa Rusconi; Stefania Re Depaolini; Sandrine Thieffine; Roberta Bosotti; Sonia Troiani;

Identification of candidate substrates for poly(ADP‐ribose) polymerase‐2 (PARP2) in the absence of DNA damage using high‐density protein microarrays

Abstract

Poly(ADP‐ribose) polymerase‐2 (PARP2) belongs to the ADP‐ribosyltransferase family of enzymes that catalyze the addition of ADP‐ribose units to acceptor proteins, thus affecting many diverse cellular processes. In particular, PARP2 shares with PARP1 and, as recently highlighted, PARP3 the sole property of being catalytically activated by DNA‐strand breaks, implying key downstream functions in the cellular response to DNA damage for both enzymes. However, evidence from several studies suggests unique functions for PARP2 in additional processes, possibly mediated through its basal, DNA‐damage unstimulated ADP‐ribosylating activity. Here, we describe the development and application of a protein microarray‐based approach tailored to identify proteins that are ADP‐ribosylated by PARP2 in the absence of DNA damage mimetics and might thus represent useful entry points to the exploration of novel PARP2 functions. Several candidate substrates for PARP2 were identified and global hit enrichment analysis showed a clear enrichment in translation initiation and RNA helicase molecular functions. In addition, the top scoring candidates FK506‐binding protein 3 and SH3 and cysteine‐rich domain‐containing protein 1 were selected and confirmed in a complementary assay format as substrates for unstimulated PARP2.Structured digital abstract  A list of the large number of protein‐protein interactions described in this article is available via the MINT article ID MINT‐8201796

Related Organizations
Keywords

Adenosine Diphosphate, Tacrolimus Binding Proteins, Protein Array Analysis, Humans, Nuclear Proteins, Cell Cycle Proteins, Minichromosome Maintenance Complex Component 2, Nerve Tissue Proteins, Poly(ADP-ribose) Polymerases, DNA Damage

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    28
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Top 10%
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
Powered by OpenAIRE graph
citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
28
Top 10%
Top 10%
Top 10%
bronze