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DIGITAL.CSIC
Article . 2012 . Peer-reviewed
Data sources: DIGITAL.CSIC
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MPG.PuRe
Article . 2012
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Nature Structural & Molecular Biology
Article . 2012 . Peer-reviewed
License: Springer TDM
Data sources: Crossref
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The cryo-EM structure of the UPF–EJC complex shows UPF1 poised toward the RNA 3′ end

Authors: Melero, R.; Buchwald, G.; Castano, R.; Raabe, M.; Gil, D.; Lazaro, M.; Urlaub, H.; +2 Authors

The cryo-EM structure of the UPF–EJC complex shows UPF1 poised toward the RNA 3′ end

Abstract

Nonsense-mediated mRNA decay (NMD) is a eukaryotic surveillance pathway that degrades aberrant mRNAs containing premature termination codons (PTCs). NMD is triggered upon the assembly of the UPF surveillance complex near a PTC. In humans, UPF assembly is prompted by the exon junction complex (EJC). We investigated the molecular architecture of the human UPF complex bound to the EJC by cryo-EM and using positional restraints from additional EM, MS and biochemical interaction data. The heptameric assembly is built around UPF2, a scaffold protein with a ring structure that closes around the CH domain of UPF1, keeping the helicase region in an accessible and unwinding-competent state. UPF2 also positions UPF3 to interact with the EJC. The geometry is such that this transient complex poises UPF1 to elicit helicase activity toward the 3' end of the mRNP.

Keywords

Models, Molecular, Protein Conformation, Cryoelectron Microscopy, RNA-Binding Proteins, Exons, Codon, Nonsense, Multiprotein Complexes, Trans-Activators, Humans, Protein Interaction Domains and Motifs, RNA, Messenger, 3' Untranslated Regions, RNA Helicases, Transcription Factors

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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