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ActivatedPTHLHCoupling Feedback Phosphoinositide to G-Protein Receptor Signal-Induced Cell Adhesion Network in Human Hepatocellular Carcinoma by Systems-Theoretic Analysis

Authors: Lin Wang; Juxiang Huang; Minghu Jiang; Hong Lin; Lianxiu Qi; Haizhen Diao;

ActivatedPTHLHCoupling Feedback Phosphoinositide to G-Protein Receptor Signal-Induced Cell Adhesion Network in Human Hepatocellular Carcinoma by Systems-Theoretic Analysis

Abstract

Studies were done on analysis of biological processes in the same high expression (fold change ≥2) activatedPTHLHfeedback-mediated cell adhesion gene ontology (GO) network of human hepatocellular carcinoma (HCC) compared with the corresponding low expression activated GO network of no-tumor hepatitis/cirrhotic tissues (HBV or HCV infection). ActivatedPTHLHfeedback-mediated cell adhesion network consisted of anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolism, cell adhesion, cell differentiation, cell-cell signaling, G-protein-coupled receptor protein signaling pathway, intracellular transport, metabolism, phosphoinositide-mediated signaling, positive regulation of transcription, regulation of cyclin-dependent protein kinase activity, regulation of transcription, signal transduction, transcription, and transport in HCC. We proposed activatedPTHLHcoupling feedback phosphoinositide to G-protein receptor signal-induced cell adhesion network. Our hypothesis was verified by the different activatedPTHLHfeedback-mediated cell adhesion GO network of HCC compared with the corresponding inhibited GO network of no-tumor hepatitis/cirrhotic tissues, or the same compared with the corresponding inhibited GO network of HCC. ActivatedPTHLHcoupling feedback phosphoinositide to G-protein receptor signal-induced cell adhesion network includedBUB1B, GNG10, PTHR2, GNAZ, RFC4, UBE2C, NRXN3, BAP1, PVRL2, TROAP,andVCANin HCC from GEO dataset using gene regulatory network inference method and our programming.

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Keywords

Liver Cirrhosis, Technology, Hepatitis B virus, Carcinoma, Hepatocellular, Hepatitis, Viral, Human, Science, Hepacivirus, Protein Serine-Threonine Kinases, Phosphatidylinositols, Databases, Genetic, Biomarkers, Tumor, Cell Adhesion, Humans, Gene Regulatory Networks, Oligonucleotide Array Sequence Analysis, Feedback, Physiological, T, Q, R, Parathyroid Hormone-Related Protein, Computational Biology, Cell Differentiation, Gene Expression Regulation, Neoplastic, Medicine, Cell Adhesion Molecules, Research Article, Genes, Neoplasm

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    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
16
Average
Average
Top 10%
Green
gold