Structural Convergence in the Active Sites of a Family of Catalytic Antibodies
pmid: 9027317
Structural Convergence in the Active Sites of a Family of Catalytic Antibodies
The x-ray structures of three esterase-like catalytic antibodies identified by screening for catalytic activity the entire hybridoma repertoire, elicited in response to a phosphonate transition state analog (TSA) hapten, were analyzed. The high resolution structures account for catalysis by transition state stabilization, and in all three antibodies a tyrosine residue participates in the oxyanion hole. Despite significant conformational differences in their combining sites, the three antibodies, which are the most efficient among those elicited, achieve catalysis in essentially the same mode, suggesting that evolution for binding to a single TSA followed by screening for catalysis lead to antibodies with structural convergence.
Models, Molecular, Mice, Inbred BALB C, Binding Sites, [SDV.BBM.BS] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM], Protein Conformation, Organophosphonates, Antibodies, Catalytic, Enzyme-Linked Immunosorbent Assay, Hydrogen Bonding, Crystallography, X-Ray, Catalysis, Evolution, Molecular, Immunoglobulin Fab Fragments, Mice, [CHIM] Chemical Sciences, Animals, Tyrosine, [SDV.BBM.BC] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM], Haptens
Models, Molecular, Mice, Inbred BALB C, Binding Sites, [SDV.BBM.BS] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM], Protein Conformation, Organophosphonates, Antibodies, Catalytic, Enzyme-Linked Immunosorbent Assay, Hydrogen Bonding, Crystallography, X-Ray, Catalysis, Evolution, Molecular, Immunoglobulin Fab Fragments, Mice, [CHIM] Chemical Sciences, Animals, Tyrosine, [SDV.BBM.BC] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM], Haptens
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