Competition NMR for Detection of Hit/Lead Inhibitors of Protein-Protein Interactions
pmid: 32630327
pmc: PMC7412237
Competition NMR for Detection of Hit/Lead Inhibitors of Protein-Protein Interactions
ABSTRACTScreening for small-molecule fragments that can lead to potent inhibitors of protein-protein interactions (PPIs) is often a laborious step as the fragments cannot dissociate the targeted PPI due to their low μM-mM affinities. Here, we describe an NMR competition assay - called w-AIDA-NMR (weak-Antagonist Induced Dissociation Assay-NMR) - that is sensitive to weak μM-mM ligand-protein interactions and which can be used in initial fragment screening campaigns. By introducing point mutations in the complex’s protein that is not targeted by the inhibitor, we lower the effective affinity of the complex allowing for short fragments to dissociate the complex. We illustrate the method with the compounds that block the Mdm2/X-p53 and PD-1/PD-L1 oncogenic interactions. Targeting the PD-/PD-L1 PPI has profoundly advanced the treatment of different types of cancers.
Magnetic Resonance Spectroscopy, Programmed Cell Death 1 Receptor, small molecule, Organic chemistry, Proto-Oncogene Proteins c-mdm2, PD-1/PD-L1, NMR, Article, B7-H1 Antigen, Small Molecule Libraries, protein–protein interaction, QD241-441, Mdm2/p53, Humans, Protein Interaction Maps, Tumor Suppressor Protein p53, Protein Binding
Magnetic Resonance Spectroscopy, Programmed Cell Death 1 Receptor, small molecule, Organic chemistry, Proto-Oncogene Proteins c-mdm2, PD-1/PD-L1, NMR, Article, B7-H1 Antigen, Small Molecule Libraries, protein–protein interaction, QD241-441, Mdm2/p53, Humans, Protein Interaction Maps, Tumor Suppressor Protein p53, Protein Binding
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