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Conformational flexibility of RNA polymerase III during transcriptional elongation

Authors: Fernandez-Tornero, Carlos; Boettcher, Bettina; Rashid, Umar Jan; Steuerwald, Ulrich; Floerchinger, Beate; Devos, Damien P.; Lindner, Doris; +1 Authors

Conformational flexibility of RNA polymerase III during transcriptional elongation

Abstract

RNA polymerase (Pol) III is responsible for the transcription of genes encoding small RNAs, including tRNA, 5S rRNA and U6 RNA. Here, we report the electron cryomicroscopy structures of yeast Pol III at 9.9 Å resolution and its elongation complex at 16.5 Å resolution. Particle sub-classification reveals prominent EM densities for the two Pol III-specific subcomplexes, C31/C82/C34 and C37/C53, that can be interpreted using homology models. While the winged-helix-containing C31/C82/C34 subcomplex initiates transcription from one side of the DNA-binding cleft, the C37/C53 subcomplex accesses the transcription bubble from the opposite side of this cleft. The transcribing Pol III enzyme structure not only shows the complete incoming DNA duplex, but also reveals the exit path of newly synthesized RNA. During transcriptional elongation, the Pol III-specific subcomplexes tightly enclose the incoming DNA duplex, which likely increases processivity and provides structural insights into the conformational switch between Pol III-mediated initiation and elongation.

Keywords

Models, Molecular, RNA polymerase III, /dk/atira/pure/subjectarea/asjc/1300/1312, Transcription, Genetic, Biochemistry, Genetics and Molecular Biology(all), electron cryomicroscopy, Protein Conformation, Neuroscience(all), Cryoelectron Microscopy, RNA Polymerase III, Saccharomyces cerevisiae, Protein Structure, Tertiary, /dk/atira/pure/subjectarea/asjc/1300, /dk/atira/pure/subjectarea/asjc/2400, Structural Homology, Protein, Immunology and Microbiology(all), elongation complex, Protein Multimerization, /dk/atira/pure/subjectarea/asjc/2800, transcription elongation, Molecular Biology, transcription initiation

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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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