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International Journal of Molecular Sciences
Article . 2020 . Peer-reviewed
License: CC BY
Data sources: Crossref
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PubMed Central
Other literature type . 2020
Data sources: PubMed Central
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Molecular Interactions Stabilizing the Promatrix Metalloprotease-9·Serglycin Heteromer

Authors: Rangita Dawadi; Nabin Malla; Beate Hegge; Imin Wushur; Eli Berg; Gunbjørg Svineng; Ingebrigt Sylte; +1 Authors

Molecular Interactions Stabilizing the Promatrix Metalloprotease-9·Serglycin Heteromer

Abstract

Previous studies have shown that THP-1 cells produced an SDS-stable and reduction-sensitive complex between proMMP-9 and a chondroitin sulfate proteoglycan (CSPG) core protein. The complex could be reconstituted in vitro using purified serglycin (SG) and proMMP-9 and contained no inter-disulfide bridges. It was suggested that the complex involved both the FnII module and HPX domain of proMMP-9. The aims of the present study were to resolve the interacting regions of the molecules that form the complex and the types of interactions involved. In order to study this, we expressed and purified full-length and deletion variants of proMMP-9, purified CSPG and SG, and performed in vitro reconstitution assays, peptide arrays, protein modelling, docking, and molecular dynamics (MD) simulations. ProMMP-9 variants lacking both the FnII module and the HPX domain did not form the proMMP-9∙CSPG/SG complex. Deletion variants containing at least the FnII module or the HPX domain formed the proMMP-9∙CSPG/SG complex, as did the SG core protein without CS chains. The interacting parts covered large surface areas of both molecules and implicated dynamic and complementary ionic, hydrophobic, and hydrogen bond interactions. Hence, no short single interacting linear motifs in the two macromolecules could explain the strong SDS-stable and reduction-sensitive binding.

Keywords

Models, Molecular, in vitro reconstitution, Protein Conformation, THP-1 Cells, Vesicular Transport Proteins, Molecular Dynamics Simulation, proMMP-9 deletion variants, Article, Cell Line, Protein Domains, Sf9 Cells, Animals, Humans, proMMP-9 complexes, proMMP-9, Sequence Deletion, Binding Sites, VDP::Medisinske Fag: 700::Basale medisinske, odontologiske og veterinærmedisinske fag: 710, Hydrogen Bonding, peptide arrays, VDP::Medical disciplines: 700::Basic medical, dental and veterinary science disciplines: 710, molecular modelling, Molecular Docking Simulation, molecular dynamics simulation, Matrix Metalloproteinase 9, docking, serglycin, Proteoglycans, Protein Binding

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    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
4
Top 10%
Average
Average
Green
gold