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MFS transportome of the human pathogenic yeast Candida albicans

Authors: Mukhopadhayay Gauranga; Rai Versha; Manoharlal Raman; Puri Nidhi; Gaur Manisha; Choudhury Devapriya; Prasad Rajendra;

MFS transportome of the human pathogenic yeast Candida albicans

Abstract

AbstractBackgroundThe major facilitator superfamily (MFS) is one of the two largest superfamilies of membrane transporters present ubiquitously in bacteria, archaea, and eukarya and includes members that function as uniporters, symporters or antiporters. We report here the complete transportome of MFS proteins of a human pathogenic yeastCandida albicans.ResultsComputational analysis ofC. albicansgenome enabled us to identify 95 potential MFS proteins which clustered into 17 families using Saier's Transport Commission (TC) system. Among these SP, DHA1, DHA2 and ACS represented major families consisting of 22, 22, 9 and 16 members, respectively. Family designations inC. albicanswere validated by subjectingSaccharomyces cerevisiaegenome to TC system. Based on the published available genomics/proteomics data, 87 of the putative MFS genes ofC. albicanswere found to express either at mRNA or protein levels. We checked the expression of the remaining 8 genes by using RT-PCR and observed that they are not expressed under basal growth conditions implying that either these 8 genes are expressed under specific growth conditions or they may be candidates for pseudogenes.ConclusionThein silicocharacterisation of MFS transporters inCandida albicansgenome revealed a large complement of MFS transporters with most of them showing expression. Considering the clinical relevance ofC. albicansand role of MFS members in antifungal resistance and nutrient transport, this analysis would pave way for identifying their physiological relevance.

Related Organizations
Keywords

Membrane Transport Proteins, Saccharomyces cerevisiae, QH426-470, Fungal Proteins, Candida albicans, Genetics, Humans, Computer Simulation, Genome, Fungal, Databases, Protein, TP248.13-248.65, Phylogeny, Biotechnology, Research Article

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
96
Top 10%
Top 10%
Top 10%
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