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Developmental Biology
Article
License: Elsevier Non-Commercial
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Developmental Biology
Article . 2007
License: Elsevier Non-Commercial
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Developmental Biology
Article . 2007 . Peer-reviewed
License: Elsevier Non-Commercial
Data sources: Crossref
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Identification of oscillatory genes in somitogenesis from functional genomic analysis of a human mesenchymal stem cell model

Authors: Dilusha A. William; Dilusha A. William; Stephen C. Pratt; Vladimir Markov; Douglas M. Anderson; Eric F. Rappaport; Biagio Saitta; +6 Authors

Identification of oscillatory genes in somitogenesis from functional genomic analysis of a human mesenchymal stem cell model

Abstract

During somitogenesis, oscillatory expression of genes in the notch and wnt signaling pathways plays a key role in regulating segmentation. These oscillations in expression levels are elements of a species-specific developmental mechanism. To date, the periodicity and components of the human clock remain unstudied. Here we show that a human mesenchymal stem/stromal cell (MSC) model can be induced to display oscillatory gene expression. We observed that the known cycling gene HES1 oscillated with a 5 h period consistent with available data on the rate of somitogenesis in humans. We also observed cycling of Hes1 expression in mouse C2C12 myoblasts with a period of 2 h, consistent with previous in vitro and embryonic studies. Furthermore, we used microarray and quantitative PCR (Q-PCR) analysis to identify additional genes that display oscillatory expression both in vitro and in mouse embryos. We confirmed oscillatory expression of the notch pathway gene Maml3 and the wnt pathway gene Nkd2 by whole mount in situ hybridization analysis and Q-PCR. Expression patterns of these genes were disrupted in Wnt3a(tm1Amc) mutants but not in Dll3(pu) mutants. Our results demonstrate that human and mouse in vitro models can recapitulate oscillatory expression observed in embryo and that a number of genes in multiple developmental pathways display dynamic expression in vitro.

Keywords

Mesenchymal, Oscillatory, Notch pathway, Wnt pathway, Microarray, Somitogenesis, Mice, Segmentation, Biological Clocks, Animals, Humans, Somite, Molecular Biology, Cells, Cultured, In Situ Hybridization, Body Patterning, Oligonucleotide Array Sequence Analysis, Stem cell, Gene Expression Regulation, Developmental, Cycling, Mesenchymal Stem Cells, Cell Biology, Fourier, Somites, Developmental Biology, Signal Transduction

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
62
Top 10%
Top 10%
Top 10%
hybrid