Contribution of proteasome-catalyzed peptidecis-splicing to viral targeting by CD8+T cells in HIV-1 infection
Contribution of proteasome-catalyzed peptidecis-splicing to viral targeting by CD8+T cells in HIV-1 infection
Peptides generated by proteasome-catalyzed splicing of noncontiguous amino acid sequences have been shown to constitute a source of nontemplated human leukocyte antigen class I (HLA-I) epitopes, but their role in pathogen-specific immunity remains unknown. CD8+T cells are key mediators of HIV type 1 (HIV-1) control, and identification of novel epitopes to enhance targeting of infected cells is a priority for prophylactic and therapeutic strategies. To explore the contribution of proteasome-catalyzed peptide splicing (PCPS) to HIV-1 epitope generation, we developed a broadly applicable mass spectrometry-based discovery workflow that we employed to identify spliced HLA-I–bound peptides on HIV-infected cells. We demonstrate that HIV-1–derived spliced peptides comprise a relatively minor component of the HLA-I–bound viral immunopeptidome. Although spliced HIV-1 peptides may elicit CD8+T cell responses relatively infrequently during infection, CD8+T cells primed by partially overlapping contiguous epitopes in HIV-infected individuals were able to cross-recognize spliced viral peptides, suggesting a potential role for PCPS in restricting HIV-1 escape pathways. Vaccine-mediated priming of responses to spliced HIV-1 epitopes could thus provide a novel means of exploiting epitope targets typically underutilized during natural infection.
- University College London United Kingdom
- National Center For Global Health and Medicine Japan
- Duke University United States
- University of Pennsylvania United States
- University of York United Kingdom
Proteasome Endopeptidase Complex, immunopeptidome, RNA Splicing, Datasets as Topic, Epitopes, T-Lymphocyte, HIV Infections, CD8-Positive T-Lymphocytes, Cross Reactions, peptide splicing, Cell Line, Cohort Studies, Viral Proteins, Cross-Priming, Humans, RNA-Seq, Antigens, Viral, Immune Evasion, AIDS Vaccines, human immunodeficiency virus, Histocompatibility Antigens Class I, Biological Sciences, proteasome, HIV-1, RNA, Viral, Peptides, T cell epitope
Proteasome Endopeptidase Complex, immunopeptidome, RNA Splicing, Datasets as Topic, Epitopes, T-Lymphocyte, HIV Infections, CD8-Positive T-Lymphocytes, Cross Reactions, peptide splicing, Cell Line, Cohort Studies, Viral Proteins, Cross-Priming, Humans, RNA-Seq, Antigens, Viral, Immune Evasion, AIDS Vaccines, human immunodeficiency virus, Histocompatibility Antigens Class I, Biological Sciences, proteasome, HIV-1, RNA, Viral, Peptides, T cell epitope
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