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Journal of Medical Genetics
Article . 2006 . Peer-reviewed
Data sources: Crossref
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HKU Scholars Hub
Article . 2007
Data sources: HKU Scholars Hub
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Replication of twelve association studies for Huntington’s disease residual age of onset in large Venezuelan kindreds

Authors: Housman, DE; Gayán, J; Cherny, SS; Andresen, JM; Cardon, LR; Addis, EA; AlkortaAranburu, G; +2 Authors

Replication of twelve association studies for Huntington’s disease residual age of onset in large Venezuelan kindreds

Abstract

Background: The major determinant of age of onset in Huntington’s disease is the length of the causative triplet CAG repeat. Significant variance remains, however, in residual age of onset even after repeat length is factored out. Many genetic polymorphisms have previously shown evidence of association with age of onset of Huntington’s disease in several different populations. Objective: To replicate these genetic association tests in 443 affected people from a large set of kindreds from Venezuela. Methods: Previously tested polymorphisms were analysed in the HD gene itself (HD), the GluR6 kainate glutamate receptor (GRIK2), apolipoprotein E (APOE), the transcriptional coactivator CA150 (TCERG1), the ubiquitin carboxy-terminal hydrolase L1 (UCHL1), p53 (TP53), caspase-activated DNase (DFFB), and the NR2A and NR2B glutamate receptor subunits (GRIN2A, GRIN2B). Results: The GRIN2A single-nucleotide polymorphism explains a small but considerable amount of additional variance in residual age of onset in our sample. The TCERG1 microsatellite shows a trend towards association but does not reach statistical significance, perhaps because of the uninformative nature of the polymorphism caused by extreme allele frequencies. We did not replicate the genetic association of any of the other genes. Conclusions: GRIN2A and TCERG1 may show true association with residual age of onset for Huntington’s disease. The most surprising negative result is for the GRIK2 (TAA)n polymorphism, which has previously shown association with age of onset in four independent populations with Huntington’s disease. The lack of association in the Venezuelan kindreds may be due to the extremely low frequency of the key (TAA)16 allele in this population.

Keywords

Nerve Tissue Proteins, Huntington Disease - epidemiology - genetics, Polymorphism, Single Nucleotide, Receptors, N-Methyl-D-Aspartate, Apolipoproteins E, Gene Frequency, Receptors, Kainic Acid, Receptors, Humans, Polymorphism, Age of Onset, Trans-Activators - genetics, Poly-ADP-Ribose Binding Proteins, Huntingtin Protein, Deoxyribonucleases, Receptors, N-Methyl-D-Aspartate - genetics, Nuclear Proteins, Single Nucleotide, Venezuela, N-Methyl-D-Aspartate - genetics, Ubiquitin Thiolesterase - genetics, Huntington Disease, Trans-Activators, Transcriptional Elongation Factors, Tumor Suppressor Protein p53, Trinucleotide Repeat Expansion, Ubiquitin Thiolesterase, Microsatellite Repeats

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
77
Top 10%
Top 10%
Top 10%
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bronze