Functional Interfaces, Biological Pathways, and Regulations of Interferon-Related DNA Damage Resistance Signature (IRDS) Genes
Functional Interfaces, Biological Pathways, and Regulations of Interferon-Related DNA Damage Resistance Signature (IRDS) Genes
Interferon (IFN)-related DNA damage resistant signature (IRDS) genes are a subgroup of interferon-stimulated genes (ISGs) found upregulated in different cancer types, which promotes resistance to DNA damaging chemotherapy and radiotherapy. Along with briefly discussing IFNs and signalling in this review, we highlighted how different IRDS genes are affected by viruses. On the contrary, different strategies adopted to suppress a set of IRDS genes (STAT1, IRF7, OAS family, and BST2) to induce (chemo- and radiotherapy) sensitivity were deliberated. Significant biological pathways that comprise these genes were classified, along with their frequently associated genes (IFIT1/3, IFITM1, IRF7, ISG15, MX1/2 and OAS1/3/L). Major upstream regulators from the IRDS genes were identified, and different IFN types regulating these genes were outlined. Functional interfaces of IRDS proteins with DNA/RNA/ATP/GTP/NADP biomolecules featured a well-defined pharmacophore model for STAT1/IRF7-dsDNA and OAS1/OAS3/IFIH1-dsRNA complexes, as well as for the genes binding to GDP or NADP+. The Lys amino acid was found commonly interacting with the ATP phosphate group from OAS1/EIF2AK2/IFIH1 genes. Considering the premise that targeting IRDS genes mediated resistance offers an efficient strategy to resensitize tumour cells and enhances the outcome of anti-cancer treatment, this review can add some novel insights to the field.
- UNIVERSITE PARIS 6 France
- UNIVERSITE PARIS DESCARTES France
- French National Centre for Scientific Research France
- Paris 13 University France
- University of Paris France
Transcriptional Activation, Functional site, Protein interfaces, Interferon Regulatory Factor-7, Resistance, Review, Microbiology, Medical Genetics and Genomics, Cell Line, Tumor, Receptors, Humans, IRDS genes, Upstream regulator, Adaptor Proteins, Signal Transducing, RNA, Double-Stranded, Intracellular Signaling Peptides and Proteins, RNA-Binding Proteins, DNA, Medicinsk genetik och genomik, QR1-502, [SDV] Life Sciences [q-bio], ATP, STAT1 Transcription Factor, Drug Resistance, Neoplasm, Viruses, Interferon, DNA damage, RNA, Interferons, Chemotherapy and radiotherapy, functional site, DNA Damage, Signal Transduction
Transcriptional Activation, Functional site, Protein interfaces, Interferon Regulatory Factor-7, Resistance, Review, Microbiology, Medical Genetics and Genomics, Cell Line, Tumor, Receptors, Humans, IRDS genes, Upstream regulator, Adaptor Proteins, Signal Transducing, RNA, Double-Stranded, Intracellular Signaling Peptides and Proteins, RNA-Binding Proteins, DNA, Medicinsk genetik och genomik, QR1-502, [SDV] Life Sciences [q-bio], ATP, STAT1 Transcription Factor, Drug Resistance, Neoplasm, Viruses, Interferon, DNA damage, RNA, Interferons, Chemotherapy and radiotherapy, functional site, DNA Damage, Signal Transduction
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