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Indian Journal of Medical Research
Article . 2019 . Peer-reviewed
Data sources: Crossref
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Indian Journal of Medical Research
Article
License: CC BY NC SA
Data sources: UnpayWall
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PubMed Central
Other literature type . 2019
License: CC BY NC SA
Data sources: PubMed Central
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Haplotype analysis of ADAM33 polymorphisms in asthma

A pilot study
Authors: Vishweswaraiah, Sangeetha; Ramachandra, Nallur B.; Jayaraj, B.S.; Holla, Amrutha D.; Chakraborty, Samarpana; Agrawal, Anurag; Mahesh, Padukudru A.;

Haplotype analysis of ADAM33 polymorphisms in asthma

Abstract

Background & objectives: ADAM33 is implicated as a potentially strong candidate gene for asthma and bronchial hyper-responsiveness. Many polymorphisms of ADAM33 have been studied along with ADAM33 expression in various cells of the lungs. Haplotype analysis also showed association with asthma in different populations across the world. Therefore, the aim of this study was to perform a comprehensive screening of ADAM33 polymorphisms in adult patients with asthma. Methods: Thirty five polymorphisms of ADAM33 were genotyped in 55 patients with asthma and 53 controls. The association of single nucleotide polymorphisms (SNPs) and haplotypes with phenotypes of asthma was analysed. Results: The genotype, minor allele frequency, odds ratio and Hardy–Weinberg equilibrium did not show any significant difference among cases and controls. No association was found between SNPs of ADAM33 with the severity of asthma. Correlation analysis of ADAM33 SNPs to the phenotypes, based on clinical variables and allergen sensitization, did not show significant difference. Haplotype analysis showed that rs2280090 and rs2280091 were associated with asthma in the patient group. Interpretation & conclusions: Haplotype analysis showed an association of the two SNP variations with asthma. These SNPs lead to amino acid change and are prone to phosphorylation, which may affect expression levels and protein function of ADAM33 and asthma susceptibility.

Keywords

Adult, Male, Genotype, Gene Expression Profiling, Bronchi, Pilot Projects, Middle Aged, Polymorphism, Single Nucleotide, Asthma, Linkage Disequilibrium, ADAM Proteins, Phenotype, Gene Frequency, Haplotypes, Case-Control Studies, Odds Ratio, Humans, Original Article, Female, Genetic Predisposition to Disease, Alleles

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    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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    influence
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
8
Top 10%
Top 10%
Average
Green
gold