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Design of immunogens to elicit broadly neutralizing antibodies against HIV targeting the CD4 binding site

Authors: Simone Conti; Kevin J. Kaczorowski; Ge Song; Katelyn Porter; Raiees Andrabi; Dennis R. Burton; Arup K. Chakraborty; +1 Authors

Design of immunogens to elicit broadly neutralizing antibodies against HIV targeting the CD4 binding site

Abstract

Significance A solution to the global AIDS epidemic is to develop a vaccine against HIV. This has been difficult to achieve because the virus mutates rapidly, and the antibodies induced by vaccination would need to recognize many different HIV variants. We have developed a computational framework to design panels of antigens for eliciting broadly neutralizing antibodies (bnAbs) for an HIV vaccine. An important aspect of the method is its use of the gp160 fitness landscape, which measures the ability of the virus to tolerate mutations. Most designed antigens assembled as well-ordered native-like trimers with antigenic properties favorable for vaccine studies. These antigens can be used to make meaningful proposals for immunization schedules, a significant advance in HIV vaccine design.

Keywords

AIDS Vaccines, CD4-Positive T-Lymphocytes, Models, Molecular, Protein Conformation, alpha-Helical, Binding Sites, HIV Infections, HIV Antibodies, HIV Envelope Protein gp120, Crystallography, X-Ray, HIV Envelope Protein gp41, HIV Envelope Protein gp160, Epitopes, Mutation, HIV-1, Humans, Protein Conformation, beta-Strand, Amino Acid Sequence, Antigens, Viral, Broadly Neutralizing Antibodies, Protein Binding

  • BIP!
    Impact byBIP!
    citations
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    9
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
9
Top 10%
Average
Top 10%
bronze