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FEBS Journal
Article . 2011 . Peer-reviewed
License: Wiley Online Library User Agreement
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FEBS Journal
Article . 2011
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Regulation of translational efficiency by different splice variants of the Disc large 1 oncosuppressor 5′‐UTR

Authors: Ana L, Cavatorta; Florencia, Facciuto; Marina Bugnon, Valdano; Federico, Marziali; Adriana A, Giri; Lawrence, Banks; Daniela, Gardiol;

Regulation of translational efficiency by different splice variants of the Disc large 1 oncosuppressor 5′‐UTR

Abstract

Human Disc large (DLG1) has been demonstrated to be involved in the control of cell polarity and maintenance of tissue architecture, and is frequently lost in human tumours. However, the mechanisms controlling DLG1 expression are poorly understood. To further examine the regulation of DLG1 expression, we analysed the 5′ ends of DLG1 transcripts by rapid amplification of cDNA ends polymerase chain reaction. We identified an alternative splicing event in the 5′ region of DLG1 mRNA that generates transcripts with two different 5′ untranslated regions (5′‐UTRs). We show by reporter assays that the DLG1 5′‐UTR containing an alternatively spliced exon interferes with the translation of a downstream open reading frame (ORF). However, no significant differences in mRNA stability among the DLG1 5′‐UTR variants were observed. Sequence analysis of the additional exon present in the larger DLG1 5′‐UTR showed the presence of an upstream short ORF which is lost in the short version of the 5′‐UTR DLG1. By mutagenesis and luciferase assays, we analysed the contribution of this upstream short ORF in reducing translation efficiency, and showed that its disruption can revert, to some extent, the negative regulation of large 5′‐UTR. Using computational modelling we also show that the large DLG1 5′‐UTR isoform forms a more stable structure than the short version, and this may contribute to its ability to repress translation. This represents the first analysis of the 5′ region of the DLG1 transcripts and shows that differential expression of alternatively spliced 5′‐UTRs with different translational properties could result in changes in DLG1 abundance.

Keywords

Models, Molecular, RNA Stability, Membrane Proteins, Exons, Models, Biological, Cell Line, Discs Large Homolog 1 Protein, Alternative Splicing, Kinetics, Open Reading Frames, Gene Expression Regulation, Genes, Reporter, Humans, Nucleic Acid Conformation, Protein Isoforms, Genes, Tumor Suppressor, Mutant Proteins, 5' Untranslated Regions, Databases, Nucleic Acid, Adaptor Proteins, Signal Transducing

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    15
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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Powered by OpenAIRE graph
citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
15
Top 10%
Average
Average
bronze