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Cancer Cell International
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Cancer Cell International
Article
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PubMed Central
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Cancer Cell International
Article . 2022
Data sources: DOAJ
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As a prognostic biomarker of clear cell renal cell carcinoma RUFY4 predicts immunotherapy responsiveness in a PDL1-related manner

Authors: Daojia Miao; Jian Shi; Zhiyong Xiong; Wen Xiao; Xiangui Meng; Qingyang Lv; Kairu Xie; +2 Authors

As a prognostic biomarker of clear cell renal cell carcinoma RUFY4 predicts immunotherapy responsiveness in a PDL1-related manner

Abstract

AbstractBackgroundClear cell renal cell carcinoma (ccRCC) is one of the most lethal malignancies in the urinary system and the existing immunotherapy has not achieved satisfactory outcomes. Therefore, this study aims at establishing a novel gene signature for immune infiltration and clinical outcome (overall survival and immunotherapy responsiveness) in ccRCC patients.MethodsBased on RNA sequencing data and clinical information in The Cancer Genome Atlas (TCGA) database, we calculated proportions of immune cells in 611 samples using an online tool CIBERSORTx. Multivariate survival analysis was conducted to determine crucial survival-associated immune cells and immune-infiltration-related genes (IIRGs). Next, the clinical specimens and common renal cancer cell lines were applied to confirm IIRGs expression at protein and RNA levels. Finally, functional enrichment analyses and siRNA technology targeted toRUFY4were implemented to verify its function of predicting immunotherapy response.ResultsFollicular helper T cells (TFHs) and Regulatory T cells (Tregs) were highly infiltrated in the tumor microenvironment (TME) and their relative proportions were independent prognostic factors for patients. Among IIRGs of TFHs and TREGs,RUFY4was found to be highly activated in tumor microenvironment and its co-expression network was enriched inPDL1/PD1checkpoint pathway in cancer. Additionally, knockdown ofRUFY4led to the decline ofPDL1and proliferation ability in ccRCC cell lines.ConclusionTFHs and Tregs were considered as prognostic biomarkers andRUFY4was an immunotherapeutic predictor of ccRCC patients in aPDL1-Related manner.

Related Organizations
Keywords

Clear cell renal cell carcinoma, Prognostic signatures, QH573-671, PD-1 blockade, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, Immune infiltration, Immunotherapy, Cytology, Primary Research, RC254-282

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
5
Top 10%
Average
Top 10%
Green
gold