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Structural basis for germline antibody recognition of HIV-1 immunogens

Authors: Scharf, Louise; West, Anthony P; Sievers, Stuart A; Chen, Courtney; Jiang, Siduo; Gao, Han; Gray, Matthew D; +5 Authors

Structural basis for germline antibody recognition of HIV-1 immunogens

Abstract

Efforts to elicit broadly neutralizing antibodies (bNAbs) against HIV-1 require understanding germline bNAb recognition of HIV-1 envelope glycoprotein (Env). The VRC01-class bNAb family derived from the VH1-2*02 germline allele arose in multiple HIV-1–infected donors, yet targets the CD4-binding site on Env with common interactions. Modified forms of the 426c Env that activate germline-reverted B cell receptors are candidate immunogens for eliciting VRC01-class bNAbs. We present structures of germline-reverted VRC01-class bNAbs alone and complexed with 426c-based gp120 immunogens. Germline bNAb–426c gp120 complexes showed preservation of VRC01-class signature residues and gp120 contacts, but detectably different binding modes compared to mature bNAb-gp120 complexes. Unlike typical antibody-antigen interactions, VRC01–class germline antibodies exhibited preformed antigen-binding conformations for recognizing immunogens. Affinity maturation introduced substitutions increasing induced-fit recognition and electropositivity, potentially to accommodate negatively-charged complex-type N-glycans on gp120. These results provide general principles relevant to the unusual evolution of VRC01–class bNAbs and guidelines for structure-based immunogen design.

Country
United States
Keywords

Models, Molecular, Biomedical and clinical sciences, HIV Antigens, Protein Conformation, HIV Antibodies, HIV Envelope Protein gp120, Crystallography, X-Ray, immunology, Models, biophysics, structural biology, Biology (General), Neutralizing, Crystallography, Q, R, Biophysics and Structural Biology, Biological sciences, Infectious Diseases, Medical Microbiology, HIV/AIDS, Medicine, Protein Binding, 570, QH301-705.5, Science, Immunology, 610, virus, Antibodies, Vaccine Related, Humans, human, Vaccine Related (AIDS), crystallography, Biomedical and Clinical Sciences, Prevention, broadly neutralizing antibodies, Molecular, Health sciences, HIV, Antibodies, Neutralizing, Good Health and Well Being, X-Ray, HIV-1, Sexually Transmitted Infections, Immunization, Biochemistry and Cell Biology

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    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
64
Top 10%
Top 10%
Top 1%
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