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Proceedings of the National Academy of Sciences
Article . 1998 . Peer-reviewed
Data sources: Crossref
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Structure comparison of human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein P14a indicates a functional link between the human immune system and a plant defense system

Authors: T, Szyperski; C, Fernández; C, Mumenthaler; K, Wüthrich;

Structure comparison of human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein P14a indicates a functional link between the human immune system and a plant defense system

Abstract

The human glioma pathogenesis-related protein (GliPR) is highly expressed in the brain tumor glioblastoma multiforme and exhibits 35% amino acid sequence identity with the tomato pathogenesis-related (PR) protein P14a, which has an important role for the plant defense system. A molecular model of GliPR was computed with the distance geometry programdianaon the basis of a P14a–GliPR sequence alignment and a set of 1,200 experimental NMR conformational constraints collected with P14a. The GliPR structure is represented by a group of 20 conformers with small residualdianatarget function values, lowamber-energies after restrained energy-minimization with the programopal, and an average rms deviation relative to the mean of 1.6 Å for the backbone heavy atoms. Comparison of the GliPR model with the P14a structure lead to the identification of a common partially solvent-exposed spatial cluster of four amino acid residues, His-69, Glu-88, Glu-110, and His-127 in the GliPR numeration. This cluster is conserved in all known plant PR proteins of class 1, indicating a common putative active site for GliPR and PR-1 proteins and thus a functional link between the human immune system and a plant defense system.

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Keywords

Models, Molecular, Sequence Homology, Amino Acid, Protein Conformation, Molecular Sequence Data, Membrane Proteins, Nerve Tissue Proteins, Plants, Protein Structure, Secondary, Neoplasm Proteins, Mice, Animals, Humans, Computer Simulation, Amino Acid Sequence, Disulfides, Nuclear Magnetic Resonance, Biomolecular, Sequence Alignment, Phylogeny, Plant Proteins

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
104
Top 10%
Top 10%
Top 10%
bronze