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The EMBO Journal
Article . 2004 . Peer-reviewed
License: Springer Nature TDM
Data sources: Crossref
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The EMBO Journal
Article
Data sources: UnpayWall
The EMBO Journal
Article . 2005
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Proteomic analysis identifies a new complex required for nuclear pre‐mRNA retention and splicing

Authors: Andrzej, Dziembowski; Ana-Paula, Ventura; Berthold, Rutz; Friederike, Caspary; Céline, Faux; Frédéric, Halgand; Olivier, Laprévote; +1 Authors

Proteomic analysis identifies a new complex required for nuclear pre‐mRNA retention and splicing

Abstract

Using the proteomic tandem affinity purification (TAP) method, we have purified the Saccharomyces cerevisie U2 snRNP-associated splicing factors SF3a and SF3b. While SF3a purification revealed only the expected subunits Prp9p, Prp11p and Prp21p, yeast SF3b was found to contain only six subunits, including previously known components (Rse1p, Hsh155p, Cus1p, Hsh49p), the recently identified Rds3p factor and a new small essential protein (Ysf3p) encoded by an unpredicted split ORF in the yeast genome. Surprisingly, Snu17p, the proposed yeast orthologue of the seventh human SF3b subunit, p14, was not found in the yeast complex. TAP purification revealed that Snu17p, together with Bud13p and a newly identified factor, Pml1p/Ylr016c, form a novel trimeric complex. Subunits of this complex were not essential for viability. However, they are required for efficient splicing in vitro and in vivo. Furthermore, inactivation of this complex causes pre-mRNA leakage from the nucleus. The corresponding complex was named pre-mRNA REtention and Splicing (RES). The presence of RES subunit homologues in numerous eukaryotes suggests that its function is evolutionarily conserved.

Keywords

Cell Nucleus, Saccharomyces cerevisiae Proteins, Proteome, Macromolecular Substances, RNA Splicing, Molecular Sequence Data, Ribonucleoprotein, U2 Small Nuclear, Protein Subunits, RNA Precursors, Humans, Amino Acid Sequence, Sequence Alignment, Phylogeny

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
142
Top 10%
Top 10%
Top 10%
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