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Nature Communications
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Transmembrane but not soluble helices fold inside the ribosome tunnel

Authors: Manuel Bañó-Polo; Carlos Baeza-Delgado; Silvia Tamborero; Anthony Hazel; Brayan Grau; IngMarie Nilsson; Paul Whitley; +3 Authors

Transmembrane but not soluble helices fold inside the ribosome tunnel

Abstract

AbstractIntegral membrane proteins are assembled into the ER membrane via a continuous ribosome-translocon channel. The hydrophobicity and thickness of the core of the membrane bilayer leads to the expectation that transmembrane (TM) segments minimize the cost of harbouring polar polypeptide backbones by adopting a regular pattern of hydrogen bonds to form α-helices before integration. Co-translational folding of nascent chains into an α-helical conformation in the ribosomal tunnel has been demonstrated previously, but the features governing this folding are not well understood. In particular, little is known about what features influence the propensity to acquire α-helical structure in the ribosome. Using in vitro translation of truncated nascent chains trapped within the ribosome tunnel and molecular dynamics simulations, we show that folding in the ribosome is attained for TM helices but not for soluble helices, presumably facilitating SRP (signal recognition particle) recognition and/or a favourable conformation for membrane integration upon translocon entry.

Keywords

Protein Folding, Sequence Homology, Amino Acid, Science, Q, Proteïnes de membrana, Membrane Proteins, Molecular Dynamics Simulation, Endoplasmic Reticulum, Article, Protein Structure, Secondary, Animals, Amino Acid Sequence, Hydrophobic and Hydrophilic Interactions, Ribosomes, Signal Recognition Particle

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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