Downloads provided by UsageCountsTransmembrane but not soluble helices fold inside the ribosome tunnel
Transmembrane but not soluble helices fold inside the ribosome tunnel
AbstractIntegral membrane proteins are assembled into the ER membrane via a continuous ribosome-translocon channel. The hydrophobicity and thickness of the core of the membrane bilayer leads to the expectation that transmembrane (TM) segments minimize the cost of harbouring polar polypeptide backbones by adopting a regular pattern of hydrogen bonds to form α-helices before integration. Co-translational folding of nascent chains into an α-helical conformation in the ribosomal tunnel has been demonstrated previously, but the features governing this folding are not well understood. In particular, little is known about what features influence the propensity to acquire α-helical structure in the ribosome. Using in vitro translation of truncated nascent chains trapped within the ribosome tunnel and molecular dynamics simulations, we show that folding in the ribosome is attained for TM helices but not for soluble helices, presumably facilitating SRP (signal recognition particle) recognition and/or a favourable conformation for membrane integration upon translocon entry.
- GEORGIA TECH RESEARCH CORPORATION United States
- University of Bath United Kingdom
- Stockholm University Sweden
- University of Valencia Spain
- Georgia Institute of Technology United States
Protein Folding, Sequence Homology, Amino Acid, Science, Q, Proteïnes de membrana, Membrane Proteins, Molecular Dynamics Simulation, Endoplasmic Reticulum, Article, Protein Structure, Secondary, Animals, Amino Acid Sequence, Hydrophobic and Hydrophilic Interactions, Ribosomes, Signal Recognition Particle
Protein Folding, Sequence Homology, Amino Acid, Science, Q, Proteïnes de membrana, Membrane Proteins, Molecular Dynamics Simulation, Endoplasmic Reticulum, Article, Protein Structure, Secondary, Animals, Amino Acid Sequence, Hydrophobic and Hydrophilic Interactions, Ribosomes, Signal Recognition Particle
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