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A possible role for miRNA silencing in disease phenotype variation in Swedish transthyretin V30M carriers

Authors: Olsson, Malin; Norgren, Nina; Obayashi, Konen; Plante-Bordeneuve, Violaine; Suhr, Ole B; Cederquist, Kristina; Jonasson, Jenni;

A possible role for miRNA silencing in disease phenotype variation in Swedish transthyretin V30M carriers

Abstract

Familial amyloidosis with polyneuropathy (FAP) is an autosomal dominant disease caused by transthyretin (TTR) mutations, of which V30M (TTR c.148G > A, p.Val50Met, "Val30Met") is the most common. Swedish V30M carriers display later age at onset and lower penetrance compared to other populations.In the study, 130 Swedish V30M carriers (32 early, 30 late onset and 68 asymptomatic carriers) and 50 controls, 23 French symptomatic V30M carriers and 29 controls and 18 Japanese symptomatic V30M carriers and 29 controls were included. We aimed to identify additional genetic factors in the TTR gene and its surrounding region that could have an impact on phenotype.We identified three SNPs (rs71383038, rs3794885 and rs62093482) with a significant difference in allele frequency between Swedish V30M carriers and controls. The two Swedish V30M homozygous patients present in the study also displayed homozygosity for the CA10 (rs71383038), A (rs3794885) and T (rs62093482) alleles in these SNPs. Hence, these alleles are present on the Swedish V30M haplotype. Of these, rs62093482 is located in the 3'UTR of TTR gene and thus more interesting since SNPs in the 3'UTR can affect gene expression levels by modifying microRNA (miRNA) targeting activity. miRNA target predictions revealed four potential miRNAs with predicted targets unique for the polymorphic allele.Our results are the first to show the presence of a 3'UTR polymorphism on the V30M haplotype in Swedish carriers, which can serve as a miRNA binding site potentially leading to down-regulated expression from the mutated TTR allele. This finding may be related to the low penetrance and high age at onset of the disease observed in the Swedish patient population.

Country
Sweden
Keywords

Adult, Heterozygote, Mutation, Missense, Penetrance, QH426-470, Polymorphism, Single Nucleotide, Medical Genetics and Genomics, Young Adult, Gene Frequency, Genetics, Humans, Prealbumin, Genetics(clinical), Gene Silencing, Age of Onset, Internal medicine, Alleles, Aged, Aged, 80 and over, Sweden, Familial; Humans; MicroRNA; Polymorphism, Amyloid Neuropathies, Familial, Allele Frequency; Amyloidosis; Amyloid Neuropathies, Middle Aged, RC31-1245, Medicinsk genetik och genomik, MicroRNAs, Phenotype, Single Nucleotide; Transthyretin; 3' Untranslated Regions/genetics, Research Article

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    Top 10%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
25
Average
Top 10%
Top 10%
Green
gold