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High-resolution crystal structures of tyrosine kinase SH3 domains complexed with proline-rich peptides

Authors: A, Musacchio; M, Saraste; M, Wilmanns;

High-resolution crystal structures of tyrosine kinase SH3 domains complexed with proline-rich peptides

Abstract

Src-homology 3 (SH3) domains bind to proline-rich motifs in target proteins. We have determined high-resolution crystal structures of the complexes between the SH3 domains of Abl and Fyn tyrosine kinases, and two ten-residue proline-rich peptides derived from the SH3-binding proteins 3BP-1 and 3BP-2. The X-ray data show that the basic mode of binding of both proline-rich peptides is the same. Peptides are bound over their entire length and interact with three major sites on the SH3 molecules by both hydrogen-bonding and van der Waals contacts. Residues 4-10 of the peptide adopt the conformation of a left-handed polyproline helix type II. Binding of the proline at position 2 requires a kink at the non-proline position 3.

Related Organizations
Keywords

Models, Molecular, Binding Sites, Magnetic Resonance Spectroscopy, Chemical Phenomena, Proline, Sequence Homology, Amino Acid, Chemistry, Physical, Molecular Sequence Data, Hydrogen Bonding, Crystallography, X-Ray, Proto-Oncogene Proteins c-fyn, Protein Structure, Tertiary, Models, Chemical, Proto-Oncogene Proteins, Humans, Amino Acid Sequence, Peptides, Proto-Oncogene Proteins c-abl, Sequence Alignment, Protein Binding

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Powered by OpenAIRE graph
citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
322
Top 10%
Top 1%
Top 1%