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Biochemical Journal
Article . 2014 . Peer-reviewed
Data sources: Crossref
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Characterization of the histone methyltransferase PRDM9 using biochemical, biophysical and chemical biology techniques

Authors: Koh-Stenta, Xiaoying; Joy, Joma; Poulsen, Anders; Li, Rong; Tan, Yvonne; Shim, Yoonjung; Min, Jung-Hyun; +12 Authors

Characterization of the histone methyltransferase PRDM9 using biochemical, biophysical and chemical biology techniques

Abstract

PRDM proteins have emerged as important regulators of disease and developmental processes. To gain insight into the mechanistic actions of the PRDM family, we have performed comprehensive characterization of a prototype member protein, the histone methyltransferase PRDM9, using biochemical, biophysical and chemical biology techniques. In the present paper we report the first known molecular characterization of a PRDM9-methylated recombinant histone octamer and the identification of new histone substrates for the enzyme. A single C321P mutant of the PR/SET domain was demonstrated to significantly weaken PRDM9 activity. Additionally, we have optimized a robust biochemical assay amenable to high-throughput screening to facilitate the generation of small-molecule chemical probes for this protein family. The present study has provided valuable insight into the enzymology of an intrinsically active PRDM protein.

Keywords

Models, Molecular, Proline, Molecular Sequence Data, Gene Expression, Histone-Lysine N-Methyltransferase, Recombinant Proteins, High-Throughput Screening Assays, Protein Structure, Tertiary, Substrate Specificity, Histones, Kinetics, Mice, Luminescent Measurements, Mutation, Escherichia coli, Animals, Humans, Amino Acid Sequence, Cysteine, Protein Multimerization

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    citations
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    28
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Top 10%
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
28
Top 10%
Top 10%
Top 10%
Green
bronze