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Nucleic Acids Research
Article . 2011 . Peer-reviewed
License: CC BY NC
Data sources: Crossref
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Nucleic Acids Research
Article
License: CC BY NC
Data sources: UnpayWall
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PubMed Central
Other literature type . 2011
License: CC BY NC
Data sources: PubMed Central
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MPG.PuRe
Article . 2011
Data sources: MPG.PuRe
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Identification and characterization of a novel ubiquitous nucleolar protein ‘NARR’ encoded by a gene overlapping the rab34 oncogene

Authors: Zougman, A.; Mann, M.; Wisniewski, J.;

Identification and characterization of a novel ubiquitous nucleolar protein ‘NARR’ encoded by a gene overlapping the rab34 oncogene

Abstract

There are only few reports on protein products originating from overlapping mammalian genes even though computational predictions suggest that an appreciable fraction of mammalian genes could potentially overlap. Mass spectrometry-based proteomics has now acquired the tools to probe proteins in an unbiased manner, providing direct evidence of the output of the genomic and gene expression machinery. In particular, proteomics can refine gene predictions and discover novel gene-processing events and gene arrangements. Here, we report the mass spectrometric discovery and biochemical validation of the novel protein encoded by a gene overlapping rab34 oncogene. The novel protein is highly conserved in mammals. In humans, it contains 13 distinct Nine-Amino acid Residue-Repeats (NARR) with the consensus sequence PRVIV(S/T)PR in which the serine or threonine residues are phosphorylated during M-phase. NARR is ubiquitously expressed and resides in nucleoli where it colocalizes with ribosomal DNA (rDNA) gene clusters. Its distribution only partially overlaps with upstream binding factor, one of the main regulators of RNA Polymerase I activity, and is entirely uncoupled from it in mitotic cells and upon inhibition of transcription. NARR only partially colocalizes with fibrillarin, the pre-ribosomal RNA-processing protein, positioning NARR in a separate niche within the rDNA cluster.

Keywords

Repetitive Sequences, Amino Acid, Chromosomal Proteins, Non-Histone, Molecular Sequence Data, Nuclear Proteins, RNA-Binding Proteins, Genes, rRNA, Eukaryotic Translation Initiation Factor 5A, Oncogenes, Mass Spectrometry, Mice, Peptide Initiation Factors, rab GTP-Binding Proteins, Cell Line, Tumor, Animals, Humans, Amino Acid Sequence, Molecular Biology, Pol1 Transcription Initiation Complex Proteins, Cell Nucleolus, Peptide Termination Factors

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
5
Average
Average
Average
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gold