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The Plant Journal
Article
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The Plant Journal
Article . 2005 . Peer-reviewed
License: Wiley Online Library User Agreement
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Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation‐induced senescence in Arabidopsis

Authors: Buchanan-Wollaston, V; Page, T; Harrison, E; Breeze, E; Lim, PO; Nam, HG; Lin, JF; +4 Authors

Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation‐induced senescence in Arabidopsis

Abstract

SummaryAn analysis of changes in global gene expression patterns during developmental leaf senescence in Arabidopsis has identified more than 800 genes that show a reproducible increase in transcript abundance. This extensive change illustrates the dramatic alterations in cell metabolism that underpin the developmental transition from a photosynthetically active leaf to a senescing organ which functions as a source of mobilizable nutrients. Comparison of changes in gene expression patterns during natural leaf senescence with those identified, when senescence is artificially induced in leaves induced to senesce by darkness or during sucrose starvation‐induced senescence in cell suspension cultures, has shown not only similarities but also considerable differences. The data suggest that alternative pathways for essential metabolic processes such as nitrogen mobilization are used in different senescent systems. Gene expression patterns in the senescent cell suspension cultures are more similar to those for dark‐induced senescence and this may be a consequence of sugar starvation in both tissues. Gene expression analysis in senescing leaves of plant lines defective in signalling pathways involving salicylic acid (SA), jasmonic acid (JA) and ethylene has shown that these three pathways are all required for expression of many genes during developmental senescence. The JA/ethylene pathways also appear to operate in regulating gene expression in dark‐induced and cell suspension senescence whereas the SA pathway is not involved. The importance of the SA pathway in the senescence process is illustrated by the discovery that developmental leaf senescence, but not dark‐induced senescence, is delayed in plants defective in the SA pathway.

Keywords

NITROGEN-METABOLISM, senescence, STRESS, Time Factors, salicylic acid, Arabidopsis, PROTEIN, PROGRAMMED CELL-DEATH, SUGAR STARVATION, HIGHER-PLANTS, CARBON, Gene Expression Regulation, Plant, LEAF SENESCENCE, OXIDATIVE STRESS, development, dark-induced, Arabidopsis Proteins, Gene Expression Profiling, JASMONIC ACID, INDUCED LEAF SENESCENCE, Gene Expression Regulation, Developmental, ABSCISIC-ACID, Darkness, ALTERNATIVE OXIDASE, SALICYLIC-ACID, cell suspension, signalling pathways, Signal Transduction

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    citations
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    875
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 0.1%
    influence
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    Top 1%
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 0.1%
Powered by OpenAIRE graph
citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
875
Top 0.1%
Top 1%
Top 0.1%
bronze