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Article . 2004
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Molecular Biology Reports
Article . 2005 . Peer-reviewed
License: Springer TDM
Data sources: Crossref
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The interaction of PTP-BL PDZ domains with RIL: An enigmatic role for the RIL LIM domain

Authors: Van Den Berk LCJ; Van Ham MA; Te Lindert MM; Hendriks, WJAJ; Walma, T; Aelen, J; Vuister, GW;

The interaction of PTP-BL PDZ domains with RIL: An enigmatic role for the RIL LIM domain

Abstract

PDZ domains are protein-protein interaction modules that are crucial for the assembly of structural and signaling complexes. PDZ domains specifically bind short carboxyl-terminal peptides and occasionally internal sequences that structurally resemble peptide termini. Previously, using yeast two-hybrid methodology, we studied the interaction of two PDZ domains present in the large submembranous protein tyrosine phosphatase PTP-BL with' the C-terminal half of the LIM domain-containing protein RIL. Deletion of the extreme RIL C-terminus did not eliminate binding, suggesting the presence of a PDZ binding site within the RIL LIM moiety. We have now performed experiments in mammalian cell lysates and found that the RIL C-terminus proper, but not the RIL LIM domain, can interact with PTP-BL, albeit very weakly. However, this interaction with PTP-BL PDZ domains is greatly enhanced when the combined RIL LIM domain and C-terminus is used, pointing to synergistic effects. NMR titration experiments and site-directed mutagenesis indicate that this result is not dependent on specific interactions that require surface exposed residues on the RIL LIM domain, suggesting a stabilizing role in the association with PTP-BL.

Keywords

Binding Sites, Microfilament Proteins, Molecular Sequence Data, Protein Tyrosine Phosphatase, Non-Receptor Type 13, LIM Domain Proteins, Protein Structure, Tertiary, DNA-Binding Proteins, Mice, UMCN 5.3: Cellular energy metabolism, Two-Hybrid System Techniques, COS Cells, Chlorocebus aethiops, Mutation, Animals, Amino Acid Sequence, Biophysical Chemistry, Protein Tyrosine Phosphatases, Dimerization, Nuclear Magnetic Resonance, Biomolecular, Sequence Alignment, Protein Binding

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
13
Average
Average
Average
Green