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Identification of novel radiation-induced p53-dependent transcripts extensively regulated during mouse brain development

Authors: Quintens, Roel; Verreet, Tine; Janssen, Ann; Neefs, Mieke; Leysen, Liselotte; Michaux, Arlette; Verslegers, Mieke; +5 Authors

Identification of novel radiation-induced p53-dependent transcripts extensively regulated during mouse brain development

Abstract

ABSTRACT Ionizing radiation is a potent activator of the tumor suppressor gene p53, which itself regulates the transcription of genes involved in canonical pathways such as the cell cycle, DNA repair and apoptosis as well as other biological processes like metabolism, autophagy, differentiation and development. In this study, we performed a meta-analysis on gene expression data from different in vivo and in vitro experiments to identify a signature of early radiation-responsive genes which were predicted to be predominantly regulated by p53. Moreover, we found that several genes expressed different transcript isoforms after irradiation in a p53-dependent manner. Among this gene signature, we identified novel p53 targets, some of which have not yet been functionally characterized. Surprisingly, in contrast to genes from the canonical p53-regulated pathways, our gene signature was found to be highly enriched during embryonic and post-natal brain development and during in vitro neuronal differentiation. Furthermore, we could show that for a number of genes, radiation-responsive transcript variants were upregulated during development and differentiation, while radiation non-responsive variants were not. This suggests that radiation exposure of the developing brain and immature cortical neurons results in the p53-mediated activation of a neuronal differentiation program. Overall, our results further increase the knowledge of the radiation-induced p53 network of the embryonic brain and provide more evidence concerning the importance of p53 and its transcriptional targets during mouse brain development.

Keywords

Life Sciences & Biomedicine - Other Topics, EXPRESSION, Ionizing radiation, QH301-705.5, Science, 0699 Other Biological Sciences, DNA-DAMAGE RESPONSE, BOMB SURVIVORS, Development, 41 Environmental sciences, CEREBRAL-CORTEX, p53 targets, Biology (General), Biology, P53, Science & Technology, 31 Biological sciences, Q, PROFILING REVEALS, Biology and Life Sciences, 32 Biomedical and clinical sciences, TUMOR SUPPRESSION, DIFFERENTIATION, Neuronal differentiation, IONIZING-RADIATION, EMBRYONIC STEM-CELLS, Life Sciences & Biomedicine, Alternative splicing, Embryonic brain, Research Article

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
38
Top 10%
Average
Top 10%
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