Sip1, a Novel RS Domain-Containing Protein Essential for Pre-mRNA Splicing
Sip1, a Novel RS Domain-Containing Protein Essential for Pre-mRNA Splicing
Previous studies have shown that protein-protein interactions among splicing factors may play an important role in pre-mRNA splicing. We report here identification and functional characterization of a new splicing factor, Sip1 (SC35-interacting protein 1). Sip1 was initially identified by virtue of its interaction with SC35, a splicing factor of the SR family. Sip1 interacts with not only several SR proteins but also with U1-70K and U2AF65, proteins associated with 5' and 3' splice sites, respectively. The predicted Sip1 sequence contains an arginine-serine-rich (RS) domain but does not have any known RNA-binding motifs, indicating that it is not a member of the SR family. Sip1 also contains a region with weak sequence similarity to the Drosophila splicing regulator suppressor of white apricot (SWAP). An essential role for Sip1 in pre-mRNA splicing was suggested by the observation that anti-Sip1 antibodies depleted splicing activity from HeLa nuclear extract. Purified recombinant Sip1 protein, but not other RS domain-containing proteins such as SC35, ASF/SF2, and U2AF65, restored the splicing activity of the Sip1-immunodepleted extract. Addition of U2AF65 protein further enhanced the splicing reconstitution by the Sip1 protein. Deficiency in the formation of both A and B splicing complexes in the Sip1-depleted nuclear extract indicates an important role of Sip1 in spliceosome assembly. Together, these results demonstrate that Sip1 is a novel RS domain-containing protein required for pre-mRNA splicing and that the functional role of Sip1 in splicing is distinct from those of known RS domain-containing splicing factors.
- University of Mary United States
- Washington University in St. Louis United States
Serine-Arginine Splicing Factors, Immune Sera, RNA Splicing, Molecular Sequence Data, Nuclear Proteins, Recombinant Proteins, Ribonucleoprotein, U1 Small Nuclear, Fungal Proteins, Ribonucleoproteins, RNA Precursors, Spliceosomes, Humans, Amino Acid Sequence, HeLa Cells
Serine-Arginine Splicing Factors, Immune Sera, RNA Splicing, Molecular Sequence Data, Nuclear Proteins, Recombinant Proteins, Ribonucleoprotein, U1 Small Nuclear, Fungal Proteins, Ribonucleoproteins, RNA Precursors, Spliceosomes, Humans, Amino Acid Sequence, HeLa Cells
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