PDLIM5 and susceptibility to bipolar disorder: a family-based association study and meta-analysis
PDLIM5 and susceptibility to bipolar disorder: a family-based association study and meta-analysis
The postsynaptic density-95/discs large/zone occludens-1 (PDZ) domain and LIM (Lin-11, Isl-1, and Mec-3) domain 5 (PDLIM5) gene has been analyzed as a candidate gene for both schizophrenia and bipolar disorder (BP) in Japanese samples. We performed a family-based association study to test the hypothesis that variants in PDLIM5 increase susceptibility to BP in European-Americans and a meta-analysis to clarify whether there is a single marker consistently contributing to risk for BP.Five single nucleotide polymorphisms in the PDLIM5 gene were genotyped in 290 European-American BP families. Programs Sibling-Transmission/Disequilibrium Test (sib_tdt) and PDTPHASE were used for allelic and haplotypic association, respectively. We carried out a meta-analysis combing our family-based data and case-control data from two Japanese sample sets and from two genome-wide association (GWA) studies.Our association analysis showed no single nucleotide polymorphism associated with BP. A rare haplotype consisted of rs10008257 and rs2433320 had nominal association (P=0.045), which failed to survive correction for multiple tests. The meta-analysis identified a significant allelic association at rs2433320 in all combined samples (excluding overlapped samples in GWA: overall odds ratio=0.897, 95% confidence interval: 0.838-0.961, adjusted P=0.012) and in all Caucasian samples (excluding overlapped samples in GWA: overall odds ratio=0.905, 95% confidence interval: 0.843-0.971, adjusted P=0.032), but not in the Japanese samples.PDLIM5 may have a minor effect on susceptibility to BP in Caucasians. The findings in Japanese need further confirmation in larger independent samples.
- University of Chicago United States
Bipolar Disorder, LIM Domain Proteins, Polymorphism, Single Nucleotide, Linkage Disequilibrium, Haplotypes, Confidence Intervals, Odds Ratio, Humans, Family, Genetic Predisposition to Disease, Chromosomes, Human, Pair 4, Alleles, Adaptor Proteins, Signal Transducing
Bipolar Disorder, LIM Domain Proteins, Polymorphism, Single Nucleotide, Linkage Disequilibrium, Haplotypes, Confidence Intervals, Odds Ratio, Humans, Family, Genetic Predisposition to Disease, Chromosomes, Human, Pair 4, Alleles, Adaptor Proteins, Signal Transducing
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