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Analysis of the arabidopsis REM gene family predicts functions during flower development

Authors: O. Mantegazza; V. Gregis; M.A. Mendes; P. Morandini; M. Alves Ferreira; C. M. Patreze; S. M. Nardeli; +2 Authors

Analysis of the arabidopsis REM gene family predicts functions during flower development

Abstract

The REM (Reproductive Meristem) gene family of Arabidopsis thaliana is part of the B3 DNA-binding domain superfamily. Despite the fact that several groups have worked on the REM genes for many years, little is known about the function of this transcription factor family. This study aims to identify a set of REM genes involved in flower development and to characterize their function.In order to provide an overview of the REM gene family, a detailed expression analysis for all REM genes of A. thaliana was performed and combined with a meta-analysis of ChIP-sequencing and microarray experiments.Two sets of phylogenetically closely related REM genes, namely REM23, REM24 and REM25, and REM34, REM35 and REM36, were identified as possibly being involved in the early stages of flower development. Single- and double-mutant combinations were analysed for these genes, and no phenotypic effects were detected during flower development.The data suggest that the REM34, REM35 and REM36 group is the most interesting one, as REM34 is co-expressed with the floral meristem identity (FMI) genes, they are bound by AP1, SVP, AP3 and PI, and they are expressed in the floral meristem and during the earliest stages of flower development. However, it appears that high levels of functional redundancy may conceal the exact function of these transcription factor genes.

Country
Italy
Keywords

Arabidopsis thaliana, B3 domain, Meristem, Arabidopsis, Flowers, Chromosomes, Plant, Gene Expression Regulation, Plant, flower development, FMI, transcription factor, Phylogeny, Arabidopsis Proteins, reproductive meristem, Gene Expression Regulation, Developmental, Arabidopsis thaliana ; B3 domain ; FMI ; REM gene ; floral meristem identity ; flower development ; reproductive meristem ; transcription factor, Microarray Analysis, Plants, Genetically Modified, REM gene, floral meristem identity, Multigene Family, Mutation, Transcription Factors

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
67
Top 1%
Top 10%
Top 10%
bronze