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Oncogene
Article
Data sources: UnpayWall
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PubMed Central
Other literature type . 2011
Data sources: PubMed Central
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Oncogene
Article . 2011 . Peer-reviewed
License: Springer TDM
Data sources: Crossref
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Regulation of lipid binding underlies the activation mechanism of class IA PI3-kinases

Authors: Roger L. Williams; Alex Berndt; Wai-Ching Hon;

Regulation of lipid binding underlies the activation mechanism of class IA PI3-kinases

Abstract

Somatic missense mutations in PIK3CA, which encodes the p110α catalytic subunit of phosphoinositide 3-kinases, occur frequently in human cancers. Activating mutations spread across multiple domains, some of which are located at inhibitory contact sites formed with the regulatory subunit p85α. PIK3R1, which encodes p85α, also has activating somatic mutations. We find a strong correlation between lipid kinase and lipid-binding activities for both wild-type (WT) and a representative set of oncogenic mutant complexes of p110α/p85α. Lipid binding involves both electrostatic and hydrophobic interactions. Activation caused by a phosphorylated receptor tyrosine kinase (RTK) peptide binding to the p85α N-terminal SH2 domain (nSH2) induces lipid binding. This depends on the polybasic activation loop as well as a conserved hydrophobic motif in the C-terminal region of the kinase domain. The hotspot E545K mutant largely mimics the activated WT p110α. It shows the highest basal activity and lipid binding, and is not significantly activated by an RTK phosphopeptide. Both the hotspot H1047R mutant and rare mutations (C420R, M1043I, H1047L, G1049R and p85α-N564D) also show increased basal kinase activities and lipid binding. However, their activities are further enhanced by an RTK phosphopeptide to levels markedly exceeding that of activated WT p110α. Phosphopeptide binding to p110β/p85α and p110δ/p85α complexes also induces their lipid binding. We present a crystal structure of WT p110α complexed with the p85α inter-SH2 domain and the inhibitor PIK-108. Additional to the ATP-binding pocket, an unexpected, second PIK-108 binding site is observed in the kinase C-lobe. We show a global conformational change in p110α consistent with allosteric regulation of the kinase domain by nSH2. These findings broaden our understanding of the differential biological outputs exhibited by distinct types of mutations regarding growth factor dependence, and suggest a two-tier classification scheme relating p110α and p85α mutations with signalling potential.

Related Organizations
Keywords

Models, Molecular, Aniline Compounds, Class I Phosphatidylinositol 3-Kinases, Phosphatidylethanolamines, Molecular Sequence Data, Enzyme Activators, Crystallography, X-Ray, Article, Class Ia Phosphatidylinositol 3-Kinase, Enzyme Activation, Mice, Cholesterol, Amino Acid Substitution, Chromones, Catalytic Domain, Liposomes, Phosphatidylcholines, Animals, Humans, Amino Acid Sequence, Hydrophobic and Hydrophilic Interactions

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    Top 10%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
109
Top 1%
Top 10%
Top 10%
Green
bronze
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Cancer Research