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Seventy-five genetic loci influencing the human red blood cell

Authors: Pim van der Harst; Weihua Zhang; Irene Mateo Leach; Augusto Rendon; Niek Verweij; Joban Sehmi; Dirk S Paul; +188 Authors

Seventy-five genetic loci influencing the human red blood cell

Abstract

Anaemia is a chief determinant of global ill health, contributing to cognitive impairment, growth retardation and impaired physical capacity. To understand further the genetic factors influencing red blood cells, we carried out a genome-wide association study of haemoglobin concentration and related parameters in up to 135,367 individuals. Here we identify 75 independent genetic loci associated with one or more red blood cell phenotypes at P < 10(-8), which together explain 4-9% of the phenotypic variance per trait. Using expression quantitative trait loci and bioinformatic strategies, we identify 121 candidate genes enriched in functions relevant to red blood cell biology. The candidate genes are expressed preferentially in red blood cell precursors, and 43 have haematopoietic phenotypes in Mus musculus or Drosophila melanogaster. Through open-chromatin and coding-variant analyses we identify potential causal genetic variants at 41 loci. Our findings provide extensive new insights into genetic mechanisms and biological pathways controlling red blood cell formation and function.

Keywords

Netherlands Twin Register (NTR), Male, Erythrocytes, PROTEIN, DISEASE, Hemoglobins, Mice, Genetics; Genomics, blood, Genomewide association, Cell Cycle, COMMON VARIANTS, anemia, DROSOPHILA, HEMOGLOBIN LEVELS, Drosophila melanogaster, Phenotype, Genomics, blood, Organ Specificity, Cytokines, Female, RNA Interference, TRAITS, Signal Transduction, EXPRESSION, 570, 610, Polymorphism, Single Nucleotide, SDG 3 - Good Health and Well-being, Genetic, Animals, Humans, IGMD 3: Genomic disorders and inherited multi-system disorders DCN MP - Plasticity and memory, GENOME-WIDE ASSOCIATION, Common Variants, RECEPTOR, CONSORTIUM, hemoglobin, ta3121, Hematopoiesis, Hemoglobin Levels, meta-analysis, Gene Expression Regulation, Genetic Loci, 1000 General, genome-wide association studies, Genome-Wide Association Study

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
291
Top 1%
Top 1%
Top 1%
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