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Article . 2018
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Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae

Authors: Pathania; Monisha; Acosta-Gutierrez; Silvia; Bhamidimarri; Satya Pratyusha; Basle; Arnaud; Winterhalter; Mathias; Ceccarelli; Matteo; van den Berg; +1 Authors

Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae

Abstract

The outer membranes (OM) of many Gram-negative bacteria contain general porins, which form nonspecific, large-diameter channels for the diffusional uptake of small molecules required for cell growth and function. While the porins of Enterobacteriaceae (e.g., E. coli OmpF and OmpC) have been extensively characterized structurally and biochemically, much less is known about their counterparts in Vibrionaceae. Vibrio cholerae, the causative agent of cholera, has two major porins, OmpU and OmpT, for which no structural information is available despite their importance for the bacterium. Here we report high-resolution X-ray crystal structures of V. cholerae OmpU and OmpT complemented with molecular dynamics simulations. While similar overall to other general porins, the channels of OmpU and OmpT have unusual constrictions that create narrower barriers for small-molecule permeation and change the internal electric fields of the channels. Together with electrophysiological and in vitro transport data, our results illuminate small-molecule uptake within the Vibrionaceae.

Countries
United Kingdom, United Kingdom, Italy
Keywords

Models, Molecular, crystal structure, porin, membrane channel, Protein Conformation, Porins, Molecular Dynamics Simulation, electrophysiology, Crystallography, X-Ray, outer membrane protein, Bacterial Proteins, Carbapenems, bile salts, OmpU, Bile salts; Crystal structure; Electrophysiology; Membrane channel; OmpT; OmpU; Outer membrane protein; Porin; Vibrio cholerae; Structural biology; Molecular biology, OmpT, Adhesins, Bacterial, Vibrio cholerae, Deoxycholic Acid

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    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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    influence
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
27
Top 10%
Average
Top 10%
Green
hybrid