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Département dInformatique de lEcole Normale Supérieure , Laboratoire dInformatique, de Robotique et de Microélectronique de Montpellier , Institut de Recherche en Informatique et Systèmes Aléatoires , Département d'informatique de l'École normale supérieure , Laboratoire d'Informatique, de Robotique et de Microélectronique de Montpellier , University of Wroclaw / Institute of Informatics
In this project we aim to study the foundations of processing large-scale, noisy string data. Our goal is to understand the limit of computations, and to provide new ultra-efficient algorithms and data structures for processing such data, inspired by approaches in hashing and high-dimensional geometry. We will focus on three research directions: streaming pattern matching, probabilistic text indexing, and sketching-based sting comparison. Algorithms and data structures on strings have traditionally been exploited in such fields as Bioinformatics, Information Retrieval, and Digital Security, and we expect our project to have a significant impact on these fields.
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